Integrative transcriptomic analysis of plant co-expression networks: A study of gene function prediction and knowledge transfer between species - Softcover

Mutwil, Marek

 
9783847303169: Integrative transcriptomic analysis of plant co-expression networks: A study of gene function prediction and knowledge transfer between species
Softcover
ISBN 10: 3847303163 ISBN 13: 9783847303169
Publisher: LAP LAMBERT Academic Publishing, 2011

Synopsis

Model organisms, such as Arabidopsis, are readily used in basic research due to resource availability and relative speed of data acquisition. A major goal is to transfer the acquired knowledge from these model organisms to species that are of greater importance to our society. However, due to large gene families in plants, the identification of functional equivalents of well characterized Arabidopsis genes in other plants is a non-trivial task, which often returns erroneous or inconclusive results. In this thesis, concepts of utilizing co-expression networks to help infer (i) gene function, (ii) organization of biological processes and (iii) knowledge transfer between species are introduced. An often overlooked fact by bioinformaticians is that a bioinformatic method is as useful as its accessibility. Therefore, majority of the work presented in this thesis was directed on developing freely available, user-friendly web-tools accessible for any biologist.

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About the Author

Marek A, Mutwil, PhD: Completed PhD at Potsdam University, Germany. ProjectLeader at Max Planck Institute for Molecular Plant Physiology, Germany.

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Publisher
LAP LAMBERT Academic Publishing
Publication date
2011
Language
English
ISBN 10 
3847303163
ISBN 13 
9783847303169
Binding
Paperback
Number of pages
120