Artificial Intelligence in Bioinformatics: From Omics Analysis to Deep Learning and Network Mining reviews the main applications of the topic, from omics analysis to deep learning and network mining. The book includes a rigorous introduction on bioinformatics, also reviewing how methods are incorporated in tasks and processes. In addition, it presents methods and theory, including content for emergent fields such as Sentiment Analysis and Network Alignment. Other sections survey how Artificial Intelligence is exploited in bioinformatics applications, including sequence analysis, structure analysis, functional analysis, protein classification, omics analysis, biomarker discovery, integrative bioinformatics, protein interaction analysis, metabolic networks analysis, and much more.
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Mario Cannataro is a Full Professor of Computer Engineering and Bioinformatics at University “Magna Graecia” of Catanzaro, Italy. He is the director of the Data Analytics research center and the chair of the Bioinformatics Laboratory. His current research interests include bioinformatics, medical informatics, artificial intelligence, sentiment analysis, data analytics, parallel and distributed computing. He is a member of the editorial boards of Briefings in Bioinformatics and IEEE/ACM Transactions on Computational Biology and Bioinformatics. He was guest editor of several special issues on bioinformatics and health informatics and organized several bioinformatics workshops in conjunction with ACM-BCB and IEEE-BIBM conferences. He has published three books and more than 300 papers in international journals and conference proceedings. Prof. Cannataro is a member of the Ethical Committee of the Calabria Region and a senior member of ACM, IEEE and SIBIM, He is currently a member of the steering committee of the Italian Bioinformatics Society (BITS) and of the Italian Association for Telemedicine and Medical Informatics (AITIM).
Artificial Intelligence is used in several application domains to solve problems with improved accuracy and speed. This work reviews the main applications of Artificial Intelligence in Bioinformatics, from omics analysis, to deep learning and network mining.
A main need for a new resource in this area is related to the fact that Artificial Intelligence is mainly treated in computer science texts, where the main focus is on computational aspects. On the other hand, bioinformatics books focus mainly on bioinformatics key methods and only touch basic aspects of Artificial Intelligence, machine learning and data mining. To face those issues, the book combines a rigorous introduction of Artificial Intelligence methods in the context of bioinformatics with a deep and systematic review of how those methods are incorporated in bioinformatics tasks and processes.
This book first recalls main methods and theory behind Artificial Intelligence, including emergent fields such as Sentiment Analysis and Network Alignment. It then surveys how Artificial Intelligence is exploited in main bioinformatics applications, including sequence analysis, structure analysis, functional analysis, protein classification, omics analysis, biomarker discovery, integrative bioinformatics, protein interaction analysis, metabolic networks analysis, network embedding, ontologies, text mining, reasoning in bioinformatics and explainable models in bioinformatics.
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